G4DNAMolecularStepByStepModel Class Reference

#include <G4DNAMolecularStepByStepModel.hh>

Inheritance diagram for G4DNAMolecularStepByStepModel:

Public Member Functions
	G4DNAMolecularStepByStepModel (const G4DNAMolecularStepByStepModel &)=delete
	G4DNAMolecularStepByStepModel (const G4String &name, std::unique_ptr< G4VITTimeStepComputer > pTimeStepper, std::unique_ptr< G4VITReactionProcess > pReactionProcess)
	G4DNAMolecularStepByStepModel (const G4String &name="DNAMolecularStepByStepModel")
void	GetApplicable (G4ITType &type1, G4ITType &type2)
const G4String &	GetName ()
G4VDNAReactionModel *	GetReactionModel ()
G4VITReactionProcess *	GetReactionProcess ()
const G4ITReactionTable *	GetReactionTable ()
G4VITTimeStepComputer *	GetTimeStepper ()
void	Initialize () override
G4DNAMolecularStepByStepModel &	operator= (const G4DNAMolecularStepByStepModel &)=delete
void	PrepareNewTimeStep ()
void	PrintInfo () override
void	SetReactionModel (G4VDNAReactionModel *)
void	SetReactionTable (G4ITReactionTable *)
	~G4DNAMolecularStepByStepModel () override

Protected Attributes
const G4DNAMolecularReactionTable *&	fMolecularReactionTable
G4String	fName
std::unique_ptr< G4VDNAReactionModel >	fpReactionModel
std::unique_ptr< G4VITReactionProcess >	fpReactionProcess
const G4ITReactionTable *	fpReactionTable
std::unique_ptr< G4VITTimeStepComputer >	fpTimeStepper
G4ITType	fType1
G4ITType	fType2

Detailed Description

G4DNAMolecularStepByStepModel :

• TimeStepper : G4DNAMolecularEncounterStepper
• ReactionProcess : G4DNAMolecularReaction Before each step, the next minimum encounter time is calculated for each pair of molecule. The minimum time step is selected. All the molecules are stepped within this time step. Then, only the relevant pair of molecules are checked for reaction.

Definition at line 63 of file G4DNAMolecularStepByStepModel.hh.

Constructor & Destructor Documentation

G4DNAMolecularStepByStepModel() [1/3]

G4DNAMolecularStepByStepModel::G4DNAMolecularStepByStepModel

(

const G4String &

name = "DNAMolecularStepByStepModel"

)

Definition at line 39 of file G4DNAMolecularStepByStepModel.cc.

    : G4DNAMolecularStepByStepModel(name,
                                    std::unique_ptr<G4DNAMoleculeEncounterStepper>(new G4DNAMoleculeEncounterStepper()),
                                    std::unique_ptr<G4DNAMolecularReaction>(new G4DNAMolecularReaction()))
{
}

G4DNAMolecularStepByStepModel() [2/3]

G4DNAMolecularStepByStepModel::G4DNAMolecularStepByStepModel	(	const G4String &	name,
		std::unique_ptr< G4VITTimeStepComputer >	pTimeStepper,
		std::unique_ptr< G4VITReactionProcess >	pReactionProcess
	)

Definition at line 46 of file G4DNAMolecularStepByStepModel.cc.

    : G4VITStepModel(std::move(pTimeStepper),
                     std::move(pReactionProcess),
                     name)
    , fMolecularReactionTable(reference_cast<const G4DNAMolecularReactionTable*>(fpReactionTable))
{
    fType1 = G4Molecule::ITType();
    fType2 = G4Molecule::ITType();
}

References G4VITStepModel::fType1, and G4VITStepModel::fType2.

G4DNAMolecularStepByStepModel() [3/3]

G4DNAMolecularStepByStepModel::G4DNAMolecularStepByStepModel ( const G4DNAMolecularStepByStepModel &  )

delete

~G4DNAMolecularStepByStepModel()

G4DNAMolecularStepByStepModel::~G4DNAMolecularStepByStepModel ( )

overridedefault

Member Function Documentation

GetApplicable()

void G4VITStepModel::GetApplicable ( G4ITType &  type1, G4ITType &  type2  )

inherited

Definition at line 54 of file G4VITStepModel.cc.

{
    type1 = fType1;
    type2 = fType2;
    PrintInfo();
}

References G4VITStepModel::fType1, G4VITStepModel::fType2, and G4VITStepModel::PrintInfo().

Referenced by G4ITModelHandler::RegisterModel().

GetName()

const G4String & G4VITStepModel::GetName ( )

inherited

Definition at line 94 of file G4VITStepModel.cc.

{
    return fName;
}

References G4VITStepModel::fName.

GetReactionModel()

G4VDNAReactionModel * G4DNAMolecularStepByStepModel::GetReactionModel

(

)

Definition at line 92 of file G4DNAMolecularStepByStepModel.cc.

{
    return fpReactionModel.get();
}

References fpReactionModel.

GetReactionProcess()

G4VITReactionProcess * G4VITStepModel::GetReactionProcess ( )

inherited

Definition at line 89 of file G4VITStepModel.cc.

{
    return fpReactionProcess.get();
}

References G4VITStepModel::fpReactionProcess.

Referenced by G4ITModelProcessor::CalculateMinTimeStep(), G4ITModelProcessor::ComputeTrackReaction(), and G4ITModelHandler::RegisterModel().

GetReactionTable()

const G4ITReactionTable * G4VITStepModel::GetReactionTable ( )

inherited

Definition at line 79 of file G4VITStepModel.cc.

{
    return fpReactionTable ;
}

References G4VITStepModel::fpReactionTable.

GetTimeStepper()

G4VITTimeStepComputer * G4VITStepModel::GetTimeStepper ( )

inherited

Definition at line 84 of file G4VITStepModel.cc.

{
    return fpTimeStepper.get();
}

References G4VITStepModel::fpTimeStepper.

Referenced by G4ITModelHandler::RegisterModel().

Initialize()

void G4DNAMolecularStepByStepModel::Initialize ( )

overridevirtual

Reimplemented from G4VITStepModel.

Definition at line 60 of file G4DNAMolecularStepByStepModel.cc.

{
    if(fpReactionTable == nullptr)
    {
        SetReactionTable(G4DNAMolecularReactionTable::GetReactionTable());
    }
 
    if(!fpReactionModel)
    {
        fpReactionModel.reset(new G4DNASmoluchowskiReactionModel());
    }
 
    fpReactionModel->SetReactionTable((const G4DNAMolecularReactionTable*) fpReactionTable);
 
    ((G4DNAMolecularReaction*) fpReactionProcess.get())->SetReactionModel(fpReactionModel.get());
    ((G4DNAMoleculeEncounterStepper*) fpTimeStepper.get())->SetReactionModel(fpReactionModel.get());
 
    G4VITStepModel::Initialize();
}

References fpReactionModel, G4VITStepModel::fpReactionProcess, G4VITStepModel::fpReactionTable, G4VITStepModel::fpTimeStepper, G4DNAMolecularReactionTable::GetReactionTable(), G4VITStepModel::Initialize(), SetReactionModel(), and G4VITStepModel::SetReactionTable().

operator=()

G4DNAMolecularStepByStepModel & G4DNAMolecularStepByStepModel::operator= ( const G4DNAMolecularStepByStepModel &  )

delete

PrepareNewTimeStep()

void G4VITStepModel::PrepareNewTimeStep ( )

inherited

Definition at line 69 of file G4VITStepModel.cc.

{
    fpTimeStepper->Prepare();
}

References G4VITStepModel::fpTimeStepper.

PrintInfo()

void G4DNAMolecularStepByStepModel::PrintInfo ( )

overridevirtual

Reimplemented from G4VITStepModel.

Definition at line 80 of file G4DNAMolecularStepByStepModel.cc.

{
#ifdef G4VERBOSE
    G4cout << fName << " will be used" << G4endl;
#endif
}

References G4VITStepModel::fName, G4cout, and G4endl.

SetReactionModel()

void G4DNAMolecularStepByStepModel::SetReactionModel

(

G4VDNAReactionModel *

pReactionModel

)

Definition at line 87 of file G4DNAMolecularStepByStepModel.cc.

{
    fpReactionModel.reset(pReactionModel);
}

References fpReactionModel.

Referenced by G4EmDNAChemistry_option2::ConstructTimeStepModel(), G4EmDNAChemistry::ConstructTimeStepModel(), G4EmDNAChemistry_option1::ConstructTimeStepModel(), and Initialize().

SetReactionTable()

void G4VITStepModel::SetReactionTable ( G4ITReactionTable *  pReactionTable )

inherited

Definition at line 74 of file G4VITStepModel.cc.

{
    fpReactionTable = pReactionTable;
}

References G4VITStepModel::fpReactionTable.

Referenced by G4DNAIndependentReactionTimeModel::Initialize(), G4DNAMolecularIRTModel::Initialize(), and Initialize().

Field Documentation

fMolecularReactionTable

const G4DNAMolecularReactionTable*& G4DNAMolecularStepByStepModel::fMolecularReactionTable

protected

Definition at line 81 of file G4DNAMolecularStepByStepModel.hh.

fName

G4String G4VITStepModel::fName

protectedinherited

Definition at line 88 of file G4VITStepModel.hh.

Referenced by G4VITStepModel::GetName(), G4DNAIndependentReactionTimeModel::PrintInfo(), G4DNAMolecularIRTModel::PrintInfo(), and PrintInfo().

fpReactionModel

std::unique_ptr<G4VDNAReactionModel> G4DNAMolecularStepByStepModel::fpReactionModel

protected

Definition at line 82 of file G4DNAMolecularStepByStepModel.hh.

Referenced by GetReactionModel(), Initialize(), and SetReactionModel().

fpReactionProcess

std::unique_ptr<G4VITReactionProcess> G4VITStepModel::fpReactionProcess

protectedinherited

Definition at line 91 of file G4VITStepModel.hh.

Referenced by G4VITStepModel::GetReactionProcess(), G4VITStepModel::Initialize(), G4DNAIndependentReactionTimeModel::Initialize(), G4DNAMolecularIRTModel::Initialize(), and Initialize().

fpReactionTable

const G4ITReactionTable* G4VITStepModel::fpReactionTable

protectedinherited

Definition at line 92 of file G4VITStepModel.hh.

Referenced by G4VITStepModel::GetReactionTable(), G4VITStepModel::Initialize(), G4DNAIndependentReactionTimeModel::Initialize(), G4DNAMolecularIRTModel::Initialize(), Initialize(), and G4VITStepModel::SetReactionTable().

fpTimeStepper

std::unique_ptr<G4VITTimeStepComputer> G4VITStepModel::fpTimeStepper

protectedinherited

Definition at line 90 of file G4VITStepModel.hh.

Referenced by G4VITStepModel::GetTimeStepper(), G4VITStepModel::Initialize(), G4DNAIndependentReactionTimeModel::Initialize(), G4DNAMolecularIRTModel::Initialize(), Initialize(), and G4VITStepModel::PrepareNewTimeStep().

fType1

G4ITType G4VITStepModel::fType1

protectedinherited

Definition at line 94 of file G4VITStepModel.hh.

Referenced by G4DNAIndependentReactionTimeModel::G4DNAIndependentReactionTimeModel(), G4DNAMolecularIRTModel::G4DNAMolecularIRTModel(), G4DNAMolecularStepByStepModel(), and G4VITStepModel::GetApplicable().

fType2

G4ITType G4VITStepModel::fType2

protectedinherited

Definition at line 95 of file G4VITStepModel.hh.

Referenced by G4DNAIndependentReactionTimeModel::G4DNAIndependentReactionTimeModel(), G4DNAMolecularIRTModel::G4DNAMolecularIRTModel(), G4DNAMolecularStepByStepModel(), and G4VITStepModel::GetApplicable().

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The documentation for this class was generated from the following files:

• source/processes/electromagnetic/dna/models/include/G4DNAMolecularStepByStepModel.hh
• source/processes/electromagnetic/dna/models/src/G4DNAMolecularStepByStepModel.cc