#include <G4GMocrenIO.hh>
Public Member Functions | |
GMocrenDataPrimitive () | |
~GMocrenDataPrimitive () | |
GMocrenDataPrimitive< T > & | operator= (const GMocrenDataPrimitive< T > &_right) |
GMocrenDataPrimitive< T > & | operator+ (const GMocrenDataPrimitive< T > &_right) |
GMocrenDataPrimitive< T > & | operator+= (const GMocrenDataPrimitive< T > &_right) |
void | clear () |
void | clearImage () |
void | setSize (int _size[3]) |
void | getSize (int _size[3]) |
void | setScale (double &_scale) |
double | getScale () |
void | setMinMax (T _minmax[2]) |
void | getMinMax (T _minmax[2]) |
void | setImage (std::vector< T * > &_image) |
void | addImage (T *_image) |
std::vector< T * > & | getImage () |
T * | getImage (int _z) |
void | setCenterPosition (float _center[3]) |
void | getCenterPosition (float _center[3]) |
void | setName (std::string &_name) |
std::string | getName () |
Protected Attributes | |
int | kSize [3] |
double | kScale |
T | kMinmax [2] |
float | kCenter [3] |
std::vector< T * > | kImage |
std::string | kDataName |
Definition at line 50 of file G4GMocrenIO.hh.
GMocrenDataPrimitive< T >::GMocrenDataPrimitive | ( | ) |
Definition at line 60 of file G4GMocrenIO.cc.
References GMocrenDataPrimitive< T >::clear().
00060 { 00061 clear(); 00062 }
GMocrenDataPrimitive< T >::~GMocrenDataPrimitive | ( | ) |
Definition at line 64 of file G4GMocrenIO.cc.
00064 { 00065 /* 00066 std::vector<short *>::iterator itr = image.begin(); 00067 for(; itr != image.end(); itr++) { 00068 delete [] *itr; 00069 } 00070 */ 00071 }
void GMocrenDataPrimitive< T >::addImage | ( | T * | _image | ) |
Definition at line 216 of file G4GMocrenIO.cc.
References GMocrenDataPrimitive< T >::kImage.
Referenced by GMocrenDataPrimitive< T >::operator+(), G4GMocrenIO::retrieveData2(), G4GMocrenIO::retrieveData3(), G4GMocrenIO::retrieveData4(), and G4GMocrenIO::setModalityImage().
00216 { 00217 kImage.push_back(_image); 00218 }
void GMocrenDataPrimitive< T >::clear | ( | ) |
Definition at line 167 of file G4GMocrenIO.cc.
References GMocrenDataPrimitive< T >::clearImage(), GMocrenDataPrimitive< T >::kCenter, GMocrenDataPrimitive< T >::kMinmax, GMocrenDataPrimitive< T >::kScale, and GMocrenDataPrimitive< T >::kSize.
Referenced by GMocrenDataPrimitive< T >::GMocrenDataPrimitive(), and G4GMocrenIO::initialize().
00167 { 00168 for(int i = 0; i < 3; i++) { 00169 kSize[i] = 0; 00170 kCenter[i] = 0.; 00171 } 00172 kScale = 1.; 00173 kMinmax[0] = (T)32109; 00174 kMinmax[1] = (T)-32109; 00175 00176 clearImage(); 00177 }
void GMocrenDataPrimitive< T >::clearImage | ( | ) |
Definition at line 179 of file G4GMocrenIO.cc.
References GMocrenDataPrimitive< T >::kImage.
Referenced by GMocrenDataPrimitive< T >::clear(), and G4GMocrenIO::clearModalityImage().
00179 { 00180 typename std::vector<T *>::iterator itr; 00181 for(itr = kImage.begin(); itr != kImage.end(); itr++) { 00182 delete [] *itr; 00183 } 00184 kImage.clear(); 00185 }
void GMocrenDataPrimitive< T >::getCenterPosition | ( | float | _center[3] | ) |
Definition at line 233 of file G4GMocrenIO.cc.
References GMocrenDataPrimitive< T >::kCenter.
Referenced by G4GMocrenIO::getModalityCenterPosition().
00233 { 00234 for(int i = 0; i < 3; i++) _center[i] = kCenter[i]; 00235 }
T * GMocrenDataPrimitive< T >::getImage | ( | int | _z | ) |
std::vector< T * > & GMocrenDataPrimitive< T >::getImage | ( | ) |
Definition at line 220 of file G4GMocrenIO.cc.
References GMocrenDataPrimitive< T >::kImage.
Referenced by G4GMocrenIO::getModalityImage(), G4GMocrenIO::storeData2(), G4GMocrenIO::storeData3(), and G4GMocrenIO::storeData4().
00220 { 00221 return kImage; 00222 }
void GMocrenDataPrimitive< T >::getMinMax | ( | T | _minmax[2] | ) |
Definition at line 207 of file G4GMocrenIO.cc.
References GMocrenDataPrimitive< T >::kMinmax.
Referenced by G4GMocrenIO::convertDensityToHU(), G4GMocrenIO::getModalityImageMax(), G4GMocrenIO::getModalityImageMin(), G4GMocrenIO::getModalityImageMinMax(), G4GMocrenIO::storeData2(), G4GMocrenIO::storeData3(), and G4GMocrenIO::storeData4().
00207 { 00208 for(int i = 0; i < 2; i++) _minmax[i] = kMinmax[i]; 00209 00210 }
std::string GMocrenDataPrimitive< T >::getName | ( | ) |
Definition at line 241 of file G4GMocrenIO.cc.
References GMocrenDataPrimitive< T >::kDataName.
00241 { 00242 return kDataName; 00243 }
double GMocrenDataPrimitive< T >::getScale | ( | ) |
Definition at line 199 of file G4GMocrenIO.cc.
References GMocrenDataPrimitive< T >::kScale.
Referenced by G4GMocrenIO::getModalityImageScale(), G4GMocrenIO::storeData2(), G4GMocrenIO::storeData3(), and G4GMocrenIO::storeData4().
00199 { 00200 return kScale; 00201 }
void GMocrenDataPrimitive< T >::getSize | ( | int | _size[3] | ) |
Definition at line 191 of file G4GMocrenIO.cc.
References GMocrenDataPrimitive< T >::kSize.
Referenced by G4GMocrenIO::getModalityImageSize(), G4GMocrenIO::storeData2(), G4GMocrenIO::storeData3(), and G4GMocrenIO::storeData4().
00191 { 00192 for(int i = 0; i < 3; i++) _size[i] = kSize[i]; 00193 }
GMocrenDataPrimitive< T > & GMocrenDataPrimitive< T >::operator+ | ( | const GMocrenDataPrimitive< T > & | _right | ) |
Definition at line 92 of file G4GMocrenIO.cc.
References GMocrenDataPrimitive< T >::addImage(), DOSERANGE, G4VisManager::errors, G4cout, G4endl, G4VisManager::GetVerbosity(), GMocrenDataPrimitive< T >::kCenter, GMocrenDataPrimitive< T >::kImage, GMocrenDataPrimitive< T >::kSize, GMocrenDataPrimitive< T >::setCenterPosition(), GMocrenDataPrimitive< T >::setMinMax(), GMocrenDataPrimitive< T >::setScale(), and GMocrenDataPrimitive< T >::setSize().
00092 { 00093 00094 GMocrenDataPrimitive<T> rprim; 00095 bool stat = true; 00096 for(int i = 0; i < 3; i++) { 00097 if(kSize[i] != _right.kSize[i]) stat = false; 00098 if(kCenter[i] != _right.kCenter[i]) stat = false; 00099 } 00100 if(!stat) { 00101 if (G4VisManager::GetVerbosity() >= G4VisManager::errors) 00102 G4cout << "Warning: operator + " 00103 << " Cannot do the operator +" 00104 << G4endl; 00105 return *this; 00106 } 00107 00108 rprim.setSize(kSize); 00109 rprim.setCenterPosition(kCenter); 00110 00111 T mms[2] = {9e100,-9e100}; 00112 //if(mms[0] > _right.minmax[0]) mms[0] = _right.minmax[0]; 00113 //if(mms[1] < _right.minmax[1]) mms[1] = _right.minmax[1]; 00114 00115 int num = kSize[0]*kSize[1]; 00116 for(int z = 0; z < kSize[2]; z++) { 00117 T * img = new T[num]; 00118 for(int xy = 0; xy < num; xy++) { 00119 img[xy] = kImage[z][xy] + _right.kImage[z][xy]; 00120 if(mms[0] > img[xy]) mms[0] = img[xy]; 00121 if(mms[1] < img[xy]) mms[1] = img[xy]; 00122 } 00123 rprim.addImage(img); 00124 } 00125 rprim.setMinMax(mms); 00126 00127 T scl = mms[1]/DOSERANGE; 00128 rprim.setScale(scl); 00129 00130 return rprim; 00131 }
GMocrenDataPrimitive< T > & GMocrenDataPrimitive< T >::operator+= | ( | const GMocrenDataPrimitive< T > & | _right | ) |
Definition at line 134 of file G4GMocrenIO.cc.
References G4VisManager::errors, G4cout, G4endl, G4VisManager::GetVerbosity(), GMocrenDataPrimitive< T >::kCenter, GMocrenDataPrimitive< T >::kImage, GMocrenDataPrimitive< T >::kMinmax, and GMocrenDataPrimitive< T >::kSize.
00134 { 00135 00136 bool stat = true; 00137 for(int i = 0; i < 3; i++) { 00138 if(kSize[i] != _right.kSize[i]) stat = false; 00139 if(kCenter[i] != _right.kCenter[i]) stat = false; 00140 } 00141 if(!stat) { 00142 if (G4VisManager::GetVerbosity() >= G4VisManager::errors) 00143 G4cout << "Warning: operator += " << G4endl 00144 << " Cannot do the operator +=" 00145 << G4endl; 00146 return *this; 00147 } 00148 00149 if(kMinmax[0] > _right.kMinmax[0]) kMinmax[0] = _right.kMinmax[0]; 00150 if(kMinmax[1] < _right.kMinmax[1]) kMinmax[1] = _right.kMinmax[1]; 00151 00152 int num = kSize[0]*kSize[1]; 00153 for(int z = 0; z < kSize[2]; z++) { 00154 for(int xy = 0; xy < num; xy++) { 00155 kImage[z][xy] += _right.kImage[z][xy]; 00156 if(kMinmax[0] > kImage[z][xy]) kMinmax[0] = kImage[z][xy]; 00157 if(kMinmax[1] < kImage[z][xy]) kMinmax[1] = kImage[z][xy]; 00158 } 00159 } 00160 00161 kScale = kMinmax[1]/DOSERANGE; 00162 00163 return *this; 00164 }
GMocrenDataPrimitive< T > & GMocrenDataPrimitive< T >::operator= | ( | const GMocrenDataPrimitive< T > & | _right | ) |
Definition at line 74 of file G4GMocrenIO.cc.
References GMocrenDataPrimitive< T >::kCenter, GMocrenDataPrimitive< T >::kImage, GMocrenDataPrimitive< T >::kMinmax, GMocrenDataPrimitive< T >::kScale, and GMocrenDataPrimitive< T >::kSize.
00074 { 00075 for(int i = 0; i < 3; i++) { 00076 kSize[i] = _right.kSize[i]; 00077 kCenter[i] = _right.kCenter[i]; 00078 } 00079 kScale = _right.kScale; 00080 for(int i = 0; i < 2; i++) kMinmax[i] = _right.kMinmax[i]; 00081 int num = kSize[0]*kSize[1]; 00082 kImage.clear(); 00083 for(int z = 0; z < kSize[2]; z++) { 00084 T * img = new T[num]; 00085 for(int i = 0; i < num; i++) img[i] =_right.kImage[z][i]; 00086 kImage.push_back(img); 00087 } 00088 return *this; 00089 }
void GMocrenDataPrimitive< T >::setCenterPosition | ( | float | _center[3] | ) |
Definition at line 229 of file G4GMocrenIO.cc.
References GMocrenDataPrimitive< T >::kCenter.
Referenced by GMocrenDataPrimitive< T >::operator+(), and G4GMocrenIO::setModalityCenterPosition().
00229 { 00230 for(int i = 0; i < 3; i++) kCenter[i] = _center[i]; 00231 }
void GMocrenDataPrimitive< T >::setImage | ( | std::vector< T * > & | _image | ) |
Definition at line 212 of file G4GMocrenIO.cc.
References GMocrenDataPrimitive< T >::kImage.
00212 { 00213 kImage = _image; 00214 }
void GMocrenDataPrimitive< T >::setMinMax | ( | T | _minmax[2] | ) |
Definition at line 203 of file G4GMocrenIO.cc.
References GMocrenDataPrimitive< T >::kMinmax.
Referenced by GMocrenDataPrimitive< T >::operator+(), G4GMocrenIO::retrieveData2(), G4GMocrenIO::retrieveData3(), G4GMocrenIO::retrieveData4(), and G4GMocrenIO::setModalityImageMinMax().
00203 { 00204 for(int i = 0; i < 2; i++) kMinmax[i] = _minmax[i]; 00205 }
void GMocrenDataPrimitive< T >::setName | ( | std::string & | _name | ) |
Definition at line 237 of file G4GMocrenIO.cc.
References GMocrenDataPrimitive< T >::kDataName.
00237 { 00238 kDataName = _name; 00239 }
void GMocrenDataPrimitive< T >::setScale | ( | double & | _scale | ) |
Definition at line 195 of file G4GMocrenIO.cc.
References GMocrenDataPrimitive< T >::kScale.
Referenced by GMocrenDataPrimitive< T >::operator+(), G4GMocrenIO::retrieveData2(), G4GMocrenIO::retrieveData3(), G4GMocrenIO::retrieveData4(), and G4GMocrenIO::setModalityImageScale().
00195 { 00196 kScale = _scale; 00197 }
void GMocrenDataPrimitive< T >::setSize | ( | int | _size[3] | ) |
Definition at line 187 of file G4GMocrenIO.cc.
References GMocrenDataPrimitive< T >::kSize.
Referenced by GMocrenDataPrimitive< T >::operator+(), G4GMocrenIO::retrieveData2(), G4GMocrenIO::retrieveData3(), G4GMocrenIO::retrieveData4(), and G4GMocrenIO::setModalityImageSize().
00187 { 00188 for(int i = 0; i < 3; i++) kSize[i] = _size[i]; 00189 }
float GMocrenDataPrimitive< T >::kCenter[3] [protected] |
Definition at line 55 of file G4GMocrenIO.hh.
Referenced by GMocrenDataPrimitive< T >::clear(), GMocrenDataPrimitive< T >::getCenterPosition(), GMocrenDataPrimitive< T >::operator+(), GMocrenDataPrimitive< T >::operator+=(), GMocrenDataPrimitive< T >::operator=(), and GMocrenDataPrimitive< T >::setCenterPosition().
std::string GMocrenDataPrimitive< T >::kDataName [protected] |
Definition at line 57 of file G4GMocrenIO.hh.
Referenced by GMocrenDataPrimitive< T >::getName(), and GMocrenDataPrimitive< T >::setName().
std::vector<T *> GMocrenDataPrimitive< T >::kImage [protected] |
Definition at line 56 of file G4GMocrenIO.hh.
Referenced by GMocrenDataPrimitive< T >::addImage(), GMocrenDataPrimitive< T >::clearImage(), GMocrenDataPrimitive< T >::getImage(), GMocrenDataPrimitive< T >::operator+(), GMocrenDataPrimitive< T >::operator+=(), GMocrenDataPrimitive< T >::operator=(), and GMocrenDataPrimitive< T >::setImage().
T GMocrenDataPrimitive< T >::kMinmax[2] [protected] |
Definition at line 54 of file G4GMocrenIO.hh.
Referenced by GMocrenDataPrimitive< T >::clear(), GMocrenDataPrimitive< T >::getMinMax(), GMocrenDataPrimitive< T >::operator+=(), GMocrenDataPrimitive< T >::operator=(), and GMocrenDataPrimitive< T >::setMinMax().
double GMocrenDataPrimitive< T >::kScale [protected] |
Definition at line 53 of file G4GMocrenIO.hh.
Referenced by GMocrenDataPrimitive< T >::clear(), GMocrenDataPrimitive< T >::getScale(), GMocrenDataPrimitive< T >::operator=(), and GMocrenDataPrimitive< T >::setScale().
int GMocrenDataPrimitive< T >::kSize[3] [protected] |